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Gene library (Genomic library) :
A collection of independent clones representing the entire genome of an organism.
First step to isolate a target DNA sequence from an organism’s genome. ;1976 L. Clark, J. Carbon
n=ln(1-p)/ln(1-f)
n: numbers of recombinant required in full
library
p: probability of target gene in library
f: rate of average insertion DNA sizes to genome;Mammal 3×109bp
If p=99% cloned fragment 20kb
f=20kb/3×109
n=690773.2;cDNA library:
A collection of independent clones representing the entire cDNA reversely transcripted from mRNA in a specific tissue of an organism in a specific phage.;Bacterial colonies consisting of genomic DNA library;Choosing vector;SUP4 基因:酵母细胞Trp-tRNA 基因的赭色突变抑制基因,含有克隆位点。
在发生Ade2-赭色突变的宿主细胞中,如果没有外源基因的插入,则突变基因表达受抑制受体菌为Ade+,形成白色菌落;当有外源基因插入时,SUP4表达将被阻断,抑制作用被消除,受体菌为Ade-,菌落为红色。;Cosmid
Half of ? phage. If ? 700000, cosmid 350000 (菌落数)
Cosmid is usually applied in large size DNA cloning,
but it is much more difficult than ? phage,because there is no much experience.
(pJB8 and c2RB are more used in gene library construction);? phage vector
1970’s, like Charon 4A and ?g t-WES,15~20kb
Presently, EMBL lines, like ?2001,?DASH, Charon 38-40,?GEM-11 etc. (replacement vectors), 20-24kb;Basic principles in choosing ? vector
Easily recover foreign DNA from ?;
Easily prepare 2 arms;
Availability of vector sequence, RE mapping;
Amber mutation (琥珀突变) in vector arms as
special screening model;
Active gam gene in recombinants;
Chi sequence in vector arms.;Enter lytic cycle
? replication give rise to 50 ? genome, then rolling cycle replicating to produce concatemer, and finally it is cut and packaged into particles.
recB/recC/recD products, controlling recombination, and
have activities of Exnulease V, inhibiting DNA ?
replication transfer to rolling cycle.
gam gene products bind and inactivate exnuclease V. ;If gam-, recA product is required to package ?, but form small plaques (小噬
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