生物信息学概论的案例1.pptVIP

MacClade By the Maddison brothers Mrbayes By John Huelsenbeck Fredrik Ronquist Features of Bayesian Method Handles complex models with many parameters Based on likelihood, statistically consistent Faster than ML method，can handle 50 taxon phylogeny Combine multiple types of data (DNA, protein，morphology, etc) 文件格式 只接受NEXUS格式 只输出NEXUS格式 用途 用来输入和编辑数据，生成NEXUS格式文件，供PAUP，MrBayes等程序使用 图形化显示和编辑进化树 性状进化分析 祖先性状重建 PAML By Ziheng Yang ?????????????????????????????????????????????????????????????????????????? Usage of PAML Phylogeny analysis based on Likelihood Substitution model p