differential dynamics of transposable elements during long-term diploidization of nicotiana section repandae (solanaceae) allopolyploid genomes转位因子的微分动力学在长期的二倍化烟草部分repandae(茄科)异源多倍体基因组.pdfVIP

differential dynamics of transposable elements during long-term diploidization of nicotiana section repandae (solanaceae) allopolyploid genomes转位因子的微分动力学在长期的二倍化烟草部分repandae(茄科)异源多倍体基因组.pdf

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differential dynamics of transposable elements during long-term diploidization of nicotiana section repandae (solanaceae) allopolyploid genomes转位因子的微分动力学在长期的二倍化烟草部分repandae(茄科)异源多倍体基因组

Differential Dynamics of Transposable Elements during Long-Term Diploidization of Nicotiana Section Repandae (Solanaceae) Allopolyploid Genomes 1¤ 1 2 3 3 Christian Parisod , Corinne Mhiri , K. Yoong Lim , James J. Clarkson , Mark W. Chase , 2 ` 1 Andrew R. Leitch , Marie-Angele Grandbastien * 1 Institut Jean-Pierre Bourgin, UMR 1318 INRA-AgroParisTech, INRA-Versailles, Versailles, France, 2 School of Biological Sciences, Queen Mary University of London, London, United Kingdom, 3 Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey, United Kingdom Abstract Evidence accumulated over the last decade has shown that allopolyploid genomes may undergo drastic reorganization. However, timing and mechanisms of structural diploidization over evolutionary timescales are still poorly known. As transposable elements (TEs) represent major and labile components of plant genomes, they likely play a pivotal role in fuelling genome changes leading to long-term diploidization. Here, we exploit the 4.5 MY old allopolyploid Nicotiana section Repandae to investigate the impact of TEs on the evolutionary dynamics of genomes. Sequence-specific amplified polymorphisms (SSAP) on seven TEs with expected contrasted dynamics were used to survey genome-wide TE insertion polymorphisms. Comparisons of TE insertions in the four allopolyploid species and descendents of the diploid species most closely related to their actual progenitors revealed that the polyploids showed considerable departure from predicted additivity of the diploids. Large numbers of new SSAP bands were observed in polyploids for two TEs, but restructur

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