原创力文档a transcriptional analysis of carotenoid, chlorophyll and plastidial isoprenoid biosynthesis genes during development and osmotic stress responses in arabidopsis thaliana的转录分析类胡萝卜素、叶绿素和plastidial类异戊二烯生物合成基因在拟南芥发展和渗透压力反应.pdfVIP
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a transcriptional analysis of carotenoid, chlorophyll and plastidial isoprenoid biosynthesis genes during development and osmotic stress responses in arabidopsis thaliana的转录分析类胡萝卜素、叶绿素和plastidial类异戊二烯生物合成基因在拟南芥发展和渗透压力反应
Meier et al. BMC Systems Biology 2011, 5:77
/1752-0509/5/77
RESEARCH ARTICLE Open Access
A transcriptional analysis of carotenoid,
chlorophyll and plastidial isoprenoid biosynthesis
genes during development and osmotic stress
responses in Arabidopsis thaliana
1 2,3 2,3 1,4 2,3*
Stuart Meier , Oren Tzfadia , Ratnakar Vallabhaneni , Chris Gehring and Eleanore T Wurtzel
Abstract
Background: The carotenoids are pure isoprenoids that are essential components of the photosynthetic apparatus
and are coordinately synthesized with chlorophylls in chloroplasts. However, little is known about the mechanisms
that regulate carotenoid biosynthesis or the mechanisms that coordinate this synthesis with that of chlorophylls
and other plastidial synthesized isoprenoid-derived compounds, including quinones, gibberellic acid and abscisic
acid. Here, a comprehensive transcriptional analysis of individual carotenoid and isoprenoid-related biosynthesis
pathway genes was performed in order to elucidate the role of transcriptional regulation in the coordinated
synthesis of these compounds and to identify regulatory components that may mediate this process in Arabidopsis
thaliana.
Results: A global microarray expression correlation analysis revealed that the phytoene synthase gene, which
encodes the first dedicated and rate-limiting enzyme of carotenogenesis, is highly co-expressed with many
photosynthesis-related genes including many isoprenoid-related biosynthesis pathway genes. Chemical and mutant
analysis revealed that induction of the co-expressed genes following germination was dependent on gibberellic
acid and brassinosteroids (BR) but was inhibited by abscisic acid (ABA). Mutant analyses further revealed that
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