Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1 英文参考文献.docVIP

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Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1 英文参考文献.doc

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Metabolic Versatility and Antibacterial Metabolite Biosynthesis Are Distinguishing Genomic Features of the Fire Blight Antagonist Pantoea vagans C9-1 英文参考文献

MetabolicVersatilityandAntibacterialMetabolite BiosynthesisAreDistinguishingGenomicFeaturesofthe FireBlightAntagonistPantoeavagansC9-1 TheoH.M.Smits1,FabioRezzonico1,TimKamber1,JochenBlom2,AlexanderGoesmann2,CarolA. Ishimaru3,Ju¨rgE.Frey1,VirginiaO.Stockwell4,BrionDuffy1* 1Swiss National Competence Center for Fire Blight, Division of Plant Protection, Agroscope Changins-Wa¨denswil ACW, Wa¨denswil, Switzerland, 2CeBiTec, Bielefeld University,Bielefeld,Germany,3DepartmentofPlantPathology,UniversityofMinnesota,St.Paul,Minnesota,UnitedStatesofAmerica,4DepartmentofBotanyandPlant Pathology,OregonStateUniversity,Corvallis,Oregon,UnitedStatesofAmerica Abstract Background:Pantoeavagansisacommercializedbiologicalcontrolagentusedagainstthepomefruitbacterialdiseasefire blight, caused by Erwinia amylovora. Compared to other biocontrol agents, relatively little is currently known regarding Pantoeagenetics.Betterunderstandingofantagonistmechanismsofactionandecologicalfitnessiscriticaltoimproving efficacy. PrincipalFindings:Genomeanalysisindicatedtwomajorfactorscontributetobiocontrolactivity:competitionforlimiting substratesandantibacterialmetaboliteproduction.Pathwaysforutilizationofabroaddiversityofsugarsandacquisitionof ironwereidentified.MetabolismofsorbitolbyP.vagansC9-1maybeamajormetabolicfeatureinbiocontroloffireblight. BiosyntheticgenesfortheantibacterialpeptidepantocinAwerefoundonachromosomal28-kbgenomicisland,andfor dapdiamideEontheplasmidpPag2.Therewasnoevidenceofpotentialvirulencefactorsthatcouldenableananimalor phytopathogeniclifestyleandnoindicationofanygenetic-basedbiosafetyriskintheantagonist. Conclusions:Identifyingkeydeterminantscontributingtodiseasesuppressionallowsthedevelopmentofproceduresto followtheirexpressioninplantaandthegenomesequencecontributestorationaleriskassessmentregardingtheuseofthe biocontrolstraininagriculturalsystems. Citation:SmitsTHM,RezzonicoF,KamberT,BlomJ,GoesmannA,etal.(2011)MetabolicVersatilityandAntibacterialMetaboliteBiosynthesisAreDi