Pyrosequencing of Mytilus galloprovincialis cDNAs Tissue-Specific Expression Patterns 英文参考文献.docVIP

Pyrosequencing of Mytilus galloprovincialis cDNAs Tissue-Specific Expression Patterns 英文参考文献.doc

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Pyrosequencing of Mytilus galloprovincialis cDNAs Tissue-Specific Expression Patterns 英文参考文献

PyrosequencingofMytilusgalloprovincialiscDNAs: Tissue-SpecificExpressionPatterns JohnA.Craft1*,JackA.Gilbert2,BenTemperton2,KateE.Dempsey1¤a,KevinAshelford3,BelaTiwari4, TomH.Hutchinson2¤b,J.KevinChipman5 1BiologicalandBiomedicalSciences,GlasgowCaledonianUniversity,Glasgow,UnitedKingdom,2PlymouthMarineLaboratory,TheUniversityofLiverpool,Liverpool, United Kingdom, 3School of Biological Sciences, The University of Liverpool, Liverpool, United Kingdom, 4Natural Environment Research Council Environmental BioinformaticsCentre,CentreforEcologyandHydrology,Wallingford,UnitedKingdom,5SchoolofBiologicalSciences,UniversityofBirmingham,Birmingham,United Kingdom Abstract Background:Mytilusspeciesareimportantinmarineecologyandinenvironmentalqualityassessment,yettheirmolecular biology is poorly understood. Molecular aspects of their reproduction, hybridisation between species, mitochondrial inheritance,skewedsexratiosofoffspringandadaptationtoclimaticandpollutionfactorsarepriorityareas. Methodology/PrincipalFindings:Tostarttoaddressthissituation,expressedgenetictranscriptsfromM.galloprovincialis were pyrosequenced. Transcripts were isolated from the digestive gland, foot, gill and mantle of both male and female mussels.Intotal,175,547sequenceswereobtainedandforfootandmantle,90%ofthesequencescouldbeassembledinto contiguousfragmentsbutthisreducedto75%forthedigestiveglandandgill.Transcriptsrelatingtoproteinmetabolism andrespirationdominatedincludingribosomalproteins,cytochromeoxidasesandNADHdehydrogenasesubunits.Tissue specificvariationwasidentifiedintranscriptsassociatedwithmitochondrialenergymetabolism,withthedigestivegland and gill having the greatest transcript abundance. Using fragment recruitment it was also possible to identify sites of potentialsmallRNAsinvolvedinmitochondrialtranscriptionalregulation.SexratiosbasedonVitellineEnvelopReceptorfor LysinandVitellineCoatLysintranscriptabundances,indicatedthatanequalsexdistributionwasmaintained.Taxonomic profiling of the M. gall

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