Pyrosequencing of Mytilus galloprovincialis cDNAs Tissue-Specific Expression Patterns 英文参考文献.docVIP
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Pyrosequencing of Mytilus galloprovincialis cDNAs Tissue-Specific Expression Patterns 英文参考文献
PyrosequencingofMytilusgalloprovincialiscDNAs:
Tissue-SpecificExpressionPatterns
JohnA.Craft1*,JackA.Gilbert2,BenTemperton2,KateE.Dempsey1¤a,KevinAshelford3,BelaTiwari4,
TomH.Hutchinson2¤b,J.KevinChipman5
1BiologicalandBiomedicalSciences,GlasgowCaledonianUniversity,Glasgow,UnitedKingdom,2PlymouthMarineLaboratory,TheUniversityofLiverpool,Liverpool,
United Kingdom, 3School of Biological Sciences, The University of Liverpool, Liverpool, United Kingdom, 4Natural Environment Research Council Environmental
BioinformaticsCentre,CentreforEcologyandHydrology,Wallingford,UnitedKingdom,5SchoolofBiologicalSciences,UniversityofBirmingham,Birmingham,United
Kingdom
Abstract
Background:Mytilusspeciesareimportantinmarineecologyandinenvironmentalqualityassessment,yettheirmolecular
biology is poorly understood. Molecular aspects of their reproduction, hybridisation between species, mitochondrial
inheritance,skewedsexratiosofoffspringandadaptationtoclimaticandpollutionfactorsarepriorityareas.
Methodology/PrincipalFindings:Tostarttoaddressthissituation,expressedgenetictranscriptsfromM.galloprovincialis
were pyrosequenced. Transcripts were isolated from the digestive gland, foot, gill and mantle of both male and female
mussels.Intotal,175,547sequenceswereobtainedandforfootandmantle,90%ofthesequencescouldbeassembledinto
contiguousfragmentsbutthisreducedto75%forthedigestiveglandandgill.Transcriptsrelatingtoproteinmetabolism
andrespirationdominatedincludingribosomalproteins,cytochromeoxidasesandNADHdehydrogenasesubunits.Tissue
specificvariationwasidentifiedintranscriptsassociatedwithmitochondrialenergymetabolism,withthedigestivegland
and gill having the greatest transcript abundance. Using fragment recruitment it was also possible to identify sites of
potentialsmallRNAsinvolvedinmitochondrialtranscriptionalregulation.SexratiosbasedonVitellineEnvelopReceptorfor
LysinandVitellineCoatLysintranscriptabundances,indicatedthatanequalsexdistributionwasmaintained.Taxonomic
profiling of the M. gall
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