Qualitative network models and genome-wide expression data define carbonnitrogen-responsive molecular machines in Arabidopsis 英文参考文献.docVIP

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Qualitative network models and genome-wide expression data define carbonnitrogen-responsive molecular machines in Arabidopsis 英文参考文献.doc

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Qualitative network models and genome-wide expression data define carbonnitrogen-responsive molecular machines in Arabidopsis 英文参考文献

Open Access Re rch 2007GutiérrezetVoal.lumesea8, Issue 1, Article R7 Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis Rodrigo A Gutiérrez¤*?, Laurence V Lejay¤*?, Alexis Dean*, Francesca Chiaromonte?, Dennis E Shasha§ and Gloria M Coruzzi* Addresses: *Department of Biology, New York University, Washington Square East, New York, NY 10003, USA. ?Departamento de Genética Molecular y Microbiología, Pontificia Universidad Católica de Chile. Alameda 340. 8331010. Santiago, Chile. ?Department of Statistics, Penn State. 326 Thomas Building, University Park, PA 16802, USA. §Courant Institute of Mathematical Sciences, New York University. 251 Mercer Street, New York, NY 10012, USA. ?Biochimie et Physiologie Moleculaire des Plantes, INRA, Place Viala, F-34060 Montpellier Cedex 1, France. ¤ These authors contributed equally to this work. Correspondence: Gloria M Coruzzi. Email: gloria.coruzzi@ Published: 11 January 2007 Received: 15 May 2006 Revised: 11 August 2006 Accepted: 11 January 2007 Genome Biology 2007, 8:R7 (doi:10.1186/gb-2007-8-1-r7) The electronic version of this article is the complete one and can be found online at /2007/8/1/R7 ? 2007 Gutiérrez et al.; licensee BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. CarbondoppsQisuaandl/iittatnitrogeniavnednientdwiocsignalingarktemthoadterlesingauArabidopsisndlatgenome-wideion by carbon/expressionnitrogen mdataetabdefineolites ocarbon/nitrogen-responsiveccurs at multiple l vels./pmolecular machines in itArabi- Abstract Background: Carbon (C) and nitrogen (N) metabolites can regulate gene expression in Arabidopsis thaliana. Here, we use multinetwork analysis of microarray data to identify mol