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\...\ Image J (Quick Guide)
A Quick Guide to ImageJ
Introduction
ImageJ is a public domain Java image processing software that was developed
by Wayne Rasband and others at the National Institutes of Health. Refer to the
ImageJ homepage /ij/ for further information. ImageJ
runs with a Java 1.1 (or later) virtual machine and is available for Windows,
Mac OS, Mac OS X and Linux.
ImageJ is designed under aspects of open architecture. It can be extended by
user-written Java plugins for special acquisition, analysis and processing tools.
This feature has been used for specific extensions in the practical trainings of the
Image Processing master course at the FH-Aachen/Jülich. Therefore, in the
context of our Image Processing course we strongly recommend to use our (!)
ImageJ Installation Version that includes all the special plugins.
ImageJ can display, edit, analyze, process, save and print images of various
formats including TIFF, GIF, JPEG, BMP, DICOM. It supports standard image
processing functions such as contrast manipulation, filtering (i.e. sharpening,
smoothing), edge detection and others. It can calculate area and pixel value
statistics of a user-defined region of interest (ROI). Measurements of distances
and angles are possible. It can create density histograms and line profile plots. It
does geometric transformations such as scaling, rotation, flips and zooming.
Spatial calibration (in units such as millimeters) as well as density or grey scale
calibration are available. The program supports any number of images (display
in separate windows) simultaneously.
Starting ImageJ on the PC’s of the Medical Informatics Lab.
After starting the computer and booting Windows (please cancel the network
login-dialog) you can start ImageJ by double-clicking the ImageJ Symbol on the
desktop. The program will start with the ImageJ main window (Fig.1):
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