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中国科技论文在线
Identification, genotyping, and molecular evolution analysis
of duck circovirus#
ZHANG Zhilong, JIA Renyong, LU Yanyan, XU Yu, WANG Mingshu,
**
5 CHENG Anchun
(Institute of Preventive Veterinary Medicine, Sichuan Agricultural University,
ChengDu 611130)
Abstract: Duck circovirus (DuCV) is a contagious immunosuppressive virus affecting many duck
species, which is responsible for multiple outbreaks in poultry industries worldwide. In this study, the
10 first DuCV isolate GH01 was identified in Sichuan by PCR, which shared a high level of nucleotide
identity (81.8–99.4%) with sequences of other DuCV isolates available in GenBank. Comparative
phylogenetic and pairwise sequence comparisons analyses indicated that DuCV could be divided into
two genotypes (DuCV-1 and DuCV-2) and six subtypes (1a, 1b, 1c, 2a, 2b and 2c) based on the
complete genome sequence. The results revealed that both DuCV-1 and DuCV-2 had evolved from the
15 same ancestor but undergone divergent evolution. Interestingly, phylogenetic analyses indicated three
isolates were classified into a cluster using complete DuCV genome sequence and cap gene, except rep
gene. Recombination analyses revealed that DuCV-2a arose from recombination between DuCV-1a
and DuCV-2c iso
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